Gene

si:ch211-281l24.3

ID

ZDB-GENE-131121-575

Name

si:ch211-281l24.3

Symbol

si:ch211-281l24.3 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:ch211-281l24.3 Human Ortholog

No data available

Associated With si:ch211-281l24.3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001841	Zinc finger, RING-type
Domain	IPR003961	Fibronectin type III
Domain	IPR040581	SNTX, thioredoxin-like domain
Domain	IPR048997	Stonustoxin-like, helical domain
Family	IPR052090	Cytolytic pore-forming toxin
Homologous_superfamily	IPR013083	Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR032675	Leucine-rich repeat domain superfamily
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Repeat	IPR001611	Leucine-rich repeat

Domain Details Per Protein

Protein	Length	Cytolytic pore-forming toxin	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin-like fold	Leucine-rich repeat	Leucine-rich repeat domain superfamily	SNTX, thioredoxin-like domain	Stonustoxin-like, helical domain	Zinc finger, RING/FYVE/PHD-type	Zinc finger, RING-type
UniProtKB:A0A8M3AIR5 InterPro	2683
UniProtKB:E7FBQ2 InterPro	2813
UniProtKB:A0A8M2B4S1 InterPro	2683
UniProtKB:A0A8M6YSK6 InterPro	2329

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:ch211-281l24.3-203 (1) Ensembl	Ensembl	9,307 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-281l24.3-204 (1) Ensembl	Ensembl	2,260 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-281l24.3-205 (1) Ensembl	Ensembl	2,124 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-281l24.3-206 (1) Ensembl	Ensembl	5,493 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-281l24.3-002 (1) Ensembl	Ensembl	930 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-281l24.3-003 (1) Ensembl	Ensembl	334 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations